Publications
Journals
Jana Sperschneider and Amitava Datta. KnotSeeker: Heuristic pseudoknot detection in long RNA sequences. RNA. 2008; 14(4): 630-40. Abstract
Jana Sperschneider and Amitava Datta. KnotSeeker: Heuristic pseudoknot detection in long RNA sequences. RNA. 2008; 14(4): 630-40. Abstract
Book Chapters
Jana Sperschneider and Amitava Datta. An Introduction to RNA Structure and Pseudoknot Prediction. In: M. Elloumi and A.Y. Zomaya. Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications. To be published by Wiley-Blackwell, 2010.
Jana Sperschneider. RNA Structure Prediction and Pseudoknots. In: V. Sperschneider with contributions by J. Sperschneider and L. Scheubert. Bioinformatics: Problem Solving Paradigms. Sects. 1.7, 2.9, 3.6., 5.5.6. Springer, Berlin, 2008. Book Summary
Jana Sperschneider and Amitava Datta. An Introduction to RNA Structure and Pseudoknot Prediction. In: M. Elloumi and A.Y. Zomaya. Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications. To be published by Wiley-Blackwell, 2010.
Jana Sperschneider. RNA Structure Prediction and Pseudoknots. In: V. Sperschneider with contributions by J. Sperschneider and L. Scheubert. Bioinformatics: Problem Solving Paradigms. Sects. 1.7, 2.9, 3.6., 5.5.6. Springer, Berlin, 2008. Book Summary
Theses
Jana Sperschneider. A new Algorithm for Detecting Pseudoknots in RNA Sequences. Diplom Thesis, Albert-Ludwigs-University Freiburg, November 2007.
Jana Sperschneider. RNA Pseudoknots: Biological Functions and Prediction Methods. Study Thesis, Albert-Ludwigs-University Freiburg, July 2007.
Jana Sperschneider. A new Algorithm for Detecting Pseudoknots in RNA Sequences. Diplom Thesis, Albert-Ludwigs-University Freiburg, November 2007.
Jana Sperschneider. RNA Pseudoknots: Biological Functions and Prediction Methods. Study Thesis, Albert-Ludwigs-University Freiburg, July 2007.